A lot of good stuff here jahjah! I'll try to answer your questions more or less in order. First off though, if the ECU is suspect there's one thing I should mention. The PO had installed a Power Commander. It's always run great, so I haven't monkeyed with it. Maybe this or one of it's connections is the problem?
I should also note that the duration of the outage isn't exact. Roughly 100 yards (3-4 seconds), but one time I was able to get out of the lane of traffic (still moving ~50 mph) before it refired, and the last time seemed relatively short. So duration isn't exactly the same each time, but never long enough to bring me to a stop. Still seems to rule out fuel pump wiring in my mind.
I replaced the fuel filter when I got the bike about seven months ago. The tank was pretty clean, and I'm careful with what I put in it. I don't think the filter is the problem.
I've had quite a bit of the accessories and wiring apart during the course of cleaning and detailing the bike since I've had it. The PO was not very meticulous about maintenance. I've done belts and valves and a dozen other minor items to get it back up to snuff. Maybe i didn't get one of the connections tight? That would seem to fall into the same category as pump wiring though.
Aside from checking all the wiring harness connections, I'm thinking I might just replace the fuel pump relay and see what happens. It may be a couple of months before I know, but worth a shot.
Finally, I don't have a helmet cam, but if it happens again, I'll make an effort to check the dash and see what it's doing. I think if it was something weird I'd have noticed, but when you're in panic mode...
Thanks again for your help. Greatly appreciated.